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mouse anti fn1  (Cusabio)


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    Structured Review

    Cusabio mouse anti fn1
    Mouse Anti Fn1, supplied by Cusabio, used in various techniques. Bioz Stars score: 92/100, based on 2 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/mouse anti fn1/product/Cusabio
    Average 92 stars, based on 2 article reviews
    mouse anti fn1 - by Bioz Stars, 2026-02
    92/100 stars

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    A Representative immunostaining images and quantification of integrin αvβ6 in kidney sections from sham and uIRI mice on days 1, 3, 7, and 14 (scale bar, 100 μm). The boxed area in the uIRI-14d panel is magnified in the right panel (scale bar, 50 μm). ( n = 4-5 per group). B Correlations between integrin αvβ6 staining quantification and renal inflammation of sham, uIRI-7d, and uIRI-14d mice. For renal inflammation, see Fig. S , it is indicated by Tnf , Il1b , Ccl2 , and Il6 relative mRNA levels detected by qPCR ( n = 14). C Relative mRNA levels of renal inflammatory factors ( Tnf , Il1b , Ccl2 , and Il6 ) in WT and Itgb6 -/- mice were detected by qPCR ( n = 3–5 per group). D , E Neutrophils, dendritic cells, T cells, B cells, and macrophages in kidneys of sham or uIRI-7d mice were detected by flow cytometry and compared. The gating strategies and representative images of different immune cells are shown in Fig. S ( n = 3–5 per group). F Comparisons of anti-inflammatory (Ly6c - F4/80 hi ) or pro-inflammatory (Ly6c + F4/80 int ) macrophages in kidneys of sham or uIRI-7d mice ( n = 3–5 per group). G Western blot of α-SMA and <t>fibronectin</t> in sham or uIRI-7d kidneys. The quantifications of the relative levels of α-SMA/α-Tubulin and fibronectin/α-Tubulin are shown ( n = 3 per group). H Representative images and quantifications of Sirius Red staining in kidney sections from sham or uIRI-7d mice (scale bar, 100 μm) ( n = 3–6 per group). I Serum BUN and creatinine in control or AAN mice. ( n = 3 per group). J Relative mRNA levels of renal inflammatory factors ( Tnf , Il1b , Ccl2 , and Il6 ) in control or AAN mice were detected by qPCR ( n = 3 per group). K Comparison of pro-inflammatory (Ly6c + F4/80 int ) macrophages in control or AAN mice kidneys ( n = 3 per group). L Western blot of α-SMA and fibronectin in control or AAN mice kidneys. The quantifications of the relative levels of α-SMA/α-Tubulin and fibronectin/α-Tubulin are shown ( n = 3 per group). M Representative images and quantifications of Sirius Red staining in kidney sections from control or AAN mice (scale bar, 100 μm) ( n = 3 per group). Data are presented as mean ± SEM of three biological replicates. One-way ANOVA ( A , C – M ), and Pearson correlation test ( B ) were performed. * p < 0.05; ** p < 0.01; *** p < 0.001; **** p < 0.0001; ns, not significant.
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    A Representative immunostaining images and quantification of integrin αvβ6 in kidney sections from sham and uIRI mice on days 1, 3, 7, and 14 (scale bar, 100 μm). The boxed area in the uIRI-14d panel is magnified in the right panel (scale bar, 50 μm). ( n = 4-5 per group). B Correlations between integrin αvβ6 staining quantification and renal inflammation of sham, uIRI-7d, and uIRI-14d mice. For renal inflammation, see Fig. S , it is indicated by Tnf , Il1b , Ccl2 , and Il6 relative mRNA levels detected by qPCR ( n = 14). C Relative mRNA levels of renal inflammatory factors ( Tnf , Il1b , Ccl2 , and Il6 ) in WT and Itgb6 -/- mice were detected by qPCR ( n = 3–5 per group). D , E Neutrophils, dendritic cells, T cells, B cells, and macrophages in kidneys of sham or uIRI-7d mice were detected by flow cytometry and compared. The gating strategies and representative images of different immune cells are shown in Fig. S ( n = 3–5 per group). F Comparisons of anti-inflammatory (Ly6c - F4/80 hi ) or pro-inflammatory (Ly6c + F4/80 int ) macrophages in kidneys of sham or uIRI-7d mice ( n = 3–5 per group). G Western blot of α-SMA and <t>fibronectin</t> in sham or uIRI-7d kidneys. The quantifications of the relative levels of α-SMA/α-Tubulin and fibronectin/α-Tubulin are shown ( n = 3 per group). H Representative images and quantifications of Sirius Red staining in kidney sections from sham or uIRI-7d mice (scale bar, 100 μm) ( n = 3–6 per group). I Serum BUN and creatinine in control or AAN mice. ( n = 3 per group). J Relative mRNA levels of renal inflammatory factors ( Tnf , Il1b , Ccl2 , and Il6 ) in control or AAN mice were detected by qPCR ( n = 3 per group). K Comparison of pro-inflammatory (Ly6c + F4/80 int ) macrophages in control or AAN mice kidneys ( n = 3 per group). L Western blot of α-SMA and fibronectin in control or AAN mice kidneys. The quantifications of the relative levels of α-SMA/α-Tubulin and fibronectin/α-Tubulin are shown ( n = 3 per group). M Representative images and quantifications of Sirius Red staining in kidney sections from control or AAN mice (scale bar, 100 μm) ( n = 3 per group). Data are presented as mean ± SEM of three biological replicates. One-way ANOVA ( A , C – M ), and Pearson correlation test ( B ) were performed. * p < 0.05; ** p < 0.01; *** p < 0.001; **** p < 0.0001; ns, not significant.
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    Cusabio mouse anti fn1
    A Representative immunostaining images and quantification of integrin αvβ6 in kidney sections from sham and uIRI mice on days 1, 3, 7, and 14 (scale bar, 100 μm). The boxed area in the uIRI-14d panel is magnified in the right panel (scale bar, 50 μm). ( n = 4-5 per group). B Correlations between integrin αvβ6 staining quantification and renal inflammation of sham, uIRI-7d, and uIRI-14d mice. For renal inflammation, see Fig. S , it is indicated by Tnf , Il1b , Ccl2 , and Il6 relative mRNA levels detected by qPCR ( n = 14). C Relative mRNA levels of renal inflammatory factors ( Tnf , Il1b , Ccl2 , and Il6 ) in WT and Itgb6 -/- mice were detected by qPCR ( n = 3–5 per group). D , E Neutrophils, dendritic cells, T cells, B cells, and macrophages in kidneys of sham or uIRI-7d mice were detected by flow cytometry and compared. The gating strategies and representative images of different immune cells are shown in Fig. S ( n = 3–5 per group). F Comparisons of anti-inflammatory (Ly6c - F4/80 hi ) or pro-inflammatory (Ly6c + F4/80 int ) macrophages in kidneys of sham or uIRI-7d mice ( n = 3–5 per group). G Western blot of α-SMA and <t>fibronectin</t> in sham or uIRI-7d kidneys. The quantifications of the relative levels of α-SMA/α-Tubulin and fibronectin/α-Tubulin are shown ( n = 3 per group). H Representative images and quantifications of Sirius Red staining in kidney sections from sham or uIRI-7d mice (scale bar, 100 μm) ( n = 3–6 per group). I Serum BUN and creatinine in control or AAN mice. ( n = 3 per group). J Relative mRNA levels of renal inflammatory factors ( Tnf , Il1b , Ccl2 , and Il6 ) in control or AAN mice were detected by qPCR ( n = 3 per group). K Comparison of pro-inflammatory (Ly6c + F4/80 int ) macrophages in control or AAN mice kidneys ( n = 3 per group). L Western blot of α-SMA and fibronectin in control or AAN mice kidneys. The quantifications of the relative levels of α-SMA/α-Tubulin and fibronectin/α-Tubulin are shown ( n = 3 per group). M Representative images and quantifications of Sirius Red staining in kidney sections from control or AAN mice (scale bar, 100 μm) ( n = 3 per group). Data are presented as mean ± SEM of three biological replicates. One-way ANOVA ( A , C – M ), and Pearson correlation test ( B ) were performed. * p < 0.05; ** p < 0.01; *** p < 0.001; **** p < 0.0001; ns, not significant.
    Mouse Anti Fn1, supplied by Cusabio, used in various techniques. Bioz Stars score: 92/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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    Proteintech mouse monoclonal anti fn1 antibody
    A Representative immunostaining images and quantification of integrin αvβ6 in kidney sections from sham and uIRI mice on days 1, 3, 7, and 14 (scale bar, 100 μm). The boxed area in the uIRI-14d panel is magnified in the right panel (scale bar, 50 μm). ( n = 4-5 per group). B Correlations between integrin αvβ6 staining quantification and renal inflammation of sham, uIRI-7d, and uIRI-14d mice. For renal inflammation, see Fig. S , it is indicated by Tnf , Il1b , Ccl2 , and Il6 relative mRNA levels detected by qPCR ( n = 14). C Relative mRNA levels of renal inflammatory factors ( Tnf , Il1b , Ccl2 , and Il6 ) in WT and Itgb6 -/- mice were detected by qPCR ( n = 3–5 per group). D , E Neutrophils, dendritic cells, T cells, B cells, and macrophages in kidneys of sham or uIRI-7d mice were detected by flow cytometry and compared. The gating strategies and representative images of different immune cells are shown in Fig. S ( n = 3–5 per group). F Comparisons of anti-inflammatory (Ly6c - F4/80 hi ) or pro-inflammatory (Ly6c + F4/80 int ) macrophages in kidneys of sham or uIRI-7d mice ( n = 3–5 per group). G Western blot of α-SMA and <t>fibronectin</t> in sham or uIRI-7d kidneys. The quantifications of the relative levels of α-SMA/α-Tubulin and fibronectin/α-Tubulin are shown ( n = 3 per group). H Representative images and quantifications of Sirius Red staining in kidney sections from sham or uIRI-7d mice (scale bar, 100 μm) ( n = 3–6 per group). I Serum BUN and creatinine in control or AAN mice. ( n = 3 per group). J Relative mRNA levels of renal inflammatory factors ( Tnf , Il1b , Ccl2 , and Il6 ) in control or AAN mice were detected by qPCR ( n = 3 per group). K Comparison of pro-inflammatory (Ly6c + F4/80 int ) macrophages in control or AAN mice kidneys ( n = 3 per group). L Western blot of α-SMA and fibronectin in control or AAN mice kidneys. The quantifications of the relative levels of α-SMA/α-Tubulin and fibronectin/α-Tubulin are shown ( n = 3 per group). M Representative images and quantifications of Sirius Red staining in kidney sections from control or AAN mice (scale bar, 100 μm) ( n = 3 per group). Data are presented as mean ± SEM of three biological replicates. One-way ANOVA ( A , C – M ), and Pearson correlation test ( B ) were performed. * p < 0.05; ** p < 0.01; *** p < 0.001; **** p < 0.0001; ns, not significant.
    Mouse Monoclonal Anti Fn1 Antibody, supplied by Proteintech, used in various techniques. Bioz Stars score: 96/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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    Proteintech mouse monoclonal anti-fn1 antibody
    A Representative immunostaining images and quantification of integrin αvβ6 in kidney sections from sham and uIRI mice on days 1, 3, 7, and 14 (scale bar, 100 μm). The boxed area in the uIRI-14d panel is magnified in the right panel (scale bar, 50 μm). ( n = 4-5 per group). B Correlations between integrin αvβ6 staining quantification and renal inflammation of sham, uIRI-7d, and uIRI-14d mice. For renal inflammation, see Fig. S , it is indicated by Tnf , Il1b , Ccl2 , and Il6 relative mRNA levels detected by qPCR ( n = 14). C Relative mRNA levels of renal inflammatory factors ( Tnf , Il1b , Ccl2 , and Il6 ) in WT and Itgb6 -/- mice were detected by qPCR ( n = 3–5 per group). D , E Neutrophils, dendritic cells, T cells, B cells, and macrophages in kidneys of sham or uIRI-7d mice were detected by flow cytometry and compared. The gating strategies and representative images of different immune cells are shown in Fig. S ( n = 3–5 per group). F Comparisons of anti-inflammatory (Ly6c - F4/80 hi ) or pro-inflammatory (Ly6c + F4/80 int ) macrophages in kidneys of sham or uIRI-7d mice ( n = 3–5 per group). G Western blot of α-SMA and <t>fibronectin</t> in sham or uIRI-7d kidneys. The quantifications of the relative levels of α-SMA/α-Tubulin and fibronectin/α-Tubulin are shown ( n = 3 per group). H Representative images and quantifications of Sirius Red staining in kidney sections from sham or uIRI-7d mice (scale bar, 100 μm) ( n = 3–6 per group). I Serum BUN and creatinine in control or AAN mice. ( n = 3 per group). J Relative mRNA levels of renal inflammatory factors ( Tnf , Il1b , Ccl2 , and Il6 ) in control or AAN mice were detected by qPCR ( n = 3 per group). K Comparison of pro-inflammatory (Ly6c + F4/80 int ) macrophages in control or AAN mice kidneys ( n = 3 per group). L Western blot of α-SMA and fibronectin in control or AAN mice kidneys. The quantifications of the relative levels of α-SMA/α-Tubulin and fibronectin/α-Tubulin are shown ( n = 3 per group). M Representative images and quantifications of Sirius Red staining in kidney sections from control or AAN mice (scale bar, 100 μm) ( n = 3 per group). Data are presented as mean ± SEM of three biological replicates. One-way ANOVA ( A , C – M ), and Pearson correlation test ( B ) were performed. * p < 0.05; ** p < 0.01; *** p < 0.001; **** p < 0.0001; ns, not significant.
    Mouse Monoclonal Anti Fn1 Antibody, supplied by Proteintech, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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    Proteintech mouse anti fibronectin fn1
    (A) Dot plot showing top-20 significant GOBP terms for PF-enriched protein cluster. The size of circle represents the number of proteins and the color indicates the -log 10 p-value. (B) Dot plot showing all significant KEGG terms for PF-enriched protein cluster. The size of circle represents the number of proteins and the color indicates the -log 10 p-value. (C) Protein expression patterns of selected GOBP terms. Left panel: log 2 FC was calculated by the median of proteins expression ratio between one and the rest regions. Proteins with top30 log 2 FC value are shown. Middle panel: annotated GOBP terms of each protein. Right panel: heatmap showing protein intensities of the 30 proteins in 11 PF biological replicates. (D) Box-whisker plots of protein expression of TGFBI and <t>FN1</t> in the ten regions from COVID-19 and non-COVID-19 lungs. (E) Immunofluorescence images of TGFBI and FN1 in COVID-19 PF region and non-COVID-19 alveolar region with ACTA2 also being stained to indicate the location of PF in COVID-19 lungs (scale bar = 50 μm).
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    Image Search Results


    A Representative immunostaining images and quantification of integrin αvβ6 in kidney sections from sham and uIRI mice on days 1, 3, 7, and 14 (scale bar, 100 μm). The boxed area in the uIRI-14d panel is magnified in the right panel (scale bar, 50 μm). ( n = 4-5 per group). B Correlations between integrin αvβ6 staining quantification and renal inflammation of sham, uIRI-7d, and uIRI-14d mice. For renal inflammation, see Fig. S , it is indicated by Tnf , Il1b , Ccl2 , and Il6 relative mRNA levels detected by qPCR ( n = 14). C Relative mRNA levels of renal inflammatory factors ( Tnf , Il1b , Ccl2 , and Il6 ) in WT and Itgb6 -/- mice were detected by qPCR ( n = 3–5 per group). D , E Neutrophils, dendritic cells, T cells, B cells, and macrophages in kidneys of sham or uIRI-7d mice were detected by flow cytometry and compared. The gating strategies and representative images of different immune cells are shown in Fig. S ( n = 3–5 per group). F Comparisons of anti-inflammatory (Ly6c - F4/80 hi ) or pro-inflammatory (Ly6c + F4/80 int ) macrophages in kidneys of sham or uIRI-7d mice ( n = 3–5 per group). G Western blot of α-SMA and fibronectin in sham or uIRI-7d kidneys. The quantifications of the relative levels of α-SMA/α-Tubulin and fibronectin/α-Tubulin are shown ( n = 3 per group). H Representative images and quantifications of Sirius Red staining in kidney sections from sham or uIRI-7d mice (scale bar, 100 μm) ( n = 3–6 per group). I Serum BUN and creatinine in control or AAN mice. ( n = 3 per group). J Relative mRNA levels of renal inflammatory factors ( Tnf , Il1b , Ccl2 , and Il6 ) in control or AAN mice were detected by qPCR ( n = 3 per group). K Comparison of pro-inflammatory (Ly6c + F4/80 int ) macrophages in control or AAN mice kidneys ( n = 3 per group). L Western blot of α-SMA and fibronectin in control or AAN mice kidneys. The quantifications of the relative levels of α-SMA/α-Tubulin and fibronectin/α-Tubulin are shown ( n = 3 per group). M Representative images and quantifications of Sirius Red staining in kidney sections from control or AAN mice (scale bar, 100 μm) ( n = 3 per group). Data are presented as mean ± SEM of three biological replicates. One-way ANOVA ( A , C – M ), and Pearson correlation test ( B ) were performed. * p < 0.05; ** p < 0.01; *** p < 0.001; **** p < 0.0001; ns, not significant.

    Journal: Cell Death & Disease

    Article Title: Knockout of integrin αvβ6 protects against renal inflammation in chronic kidney disease by reduction of pro-inflammatory macrophages

    doi: 10.1038/s41419-024-06785-5

    Figure Lengend Snippet: A Representative immunostaining images and quantification of integrin αvβ6 in kidney sections from sham and uIRI mice on days 1, 3, 7, and 14 (scale bar, 100 μm). The boxed area in the uIRI-14d panel is magnified in the right panel (scale bar, 50 μm). ( n = 4-5 per group). B Correlations between integrin αvβ6 staining quantification and renal inflammation of sham, uIRI-7d, and uIRI-14d mice. For renal inflammation, see Fig. S , it is indicated by Tnf , Il1b , Ccl2 , and Il6 relative mRNA levels detected by qPCR ( n = 14). C Relative mRNA levels of renal inflammatory factors ( Tnf , Il1b , Ccl2 , and Il6 ) in WT and Itgb6 -/- mice were detected by qPCR ( n = 3–5 per group). D , E Neutrophils, dendritic cells, T cells, B cells, and macrophages in kidneys of sham or uIRI-7d mice were detected by flow cytometry and compared. The gating strategies and representative images of different immune cells are shown in Fig. S ( n = 3–5 per group). F Comparisons of anti-inflammatory (Ly6c - F4/80 hi ) or pro-inflammatory (Ly6c + F4/80 int ) macrophages in kidneys of sham or uIRI-7d mice ( n = 3–5 per group). G Western blot of α-SMA and fibronectin in sham or uIRI-7d kidneys. The quantifications of the relative levels of α-SMA/α-Tubulin and fibronectin/α-Tubulin are shown ( n = 3 per group). H Representative images and quantifications of Sirius Red staining in kidney sections from sham or uIRI-7d mice (scale bar, 100 μm) ( n = 3–6 per group). I Serum BUN and creatinine in control or AAN mice. ( n = 3 per group). J Relative mRNA levels of renal inflammatory factors ( Tnf , Il1b , Ccl2 , and Il6 ) in control or AAN mice were detected by qPCR ( n = 3 per group). K Comparison of pro-inflammatory (Ly6c + F4/80 int ) macrophages in control or AAN mice kidneys ( n = 3 per group). L Western blot of α-SMA and fibronectin in control or AAN mice kidneys. The quantifications of the relative levels of α-SMA/α-Tubulin and fibronectin/α-Tubulin are shown ( n = 3 per group). M Representative images and quantifications of Sirius Red staining in kidney sections from control or AAN mice (scale bar, 100 μm) ( n = 3 per group). Data are presented as mean ± SEM of three biological replicates. One-way ANOVA ( A , C – M ), and Pearson correlation test ( B ) were performed. * p < 0.05; ** p < 0.01; *** p < 0.001; **** p < 0.0001; ns, not significant.

    Article Snippet: The antibodies used in western blot were as follows: goat anti-mouse integrin β6 antibody (RD, AF2389), mouse anti-mouse α-SMA Ab (Sigma-Aldrich, A5228), rabbit anti-mouse Fibronectin Ab (BOSTER, BA1772), sheep anti-mouse IL-34 Ab (RD, AF5195), rabbit anti-mouse YAP Ab (CST, 14074 S), rabbit anti-mouse p-YAP (S127) Ab (CST, 4911 S), mouse anti-mouse GAPDH Ab (Abcam, ab8245), mouse anti-mouse α-Tubulin Ab (CST, 12351 S), and mouse anti-mouse β-actin Ab (Abcam, ab8226).

    Techniques: Immunostaining, Staining, Flow Cytometry, Western Blot, Control, Comparison

    A Immunofluorescence staining for different segment-specific tubular markers (green), integrin αvβ6 (red), and DAPI (blue) in WT-uIRI-7d kidney sections (scale bar, 50 μm). Segment-specific tubular markers were used as follows: proximal tubule, LTL; distal tubule, PNA; and collecting duct, DBA. B Immunofluorescence staining for KIM-1 (green), integrin αvβ6 (red), and DAPI (blue) in uIRI-7d kidney sections (scale bar, 50 μm). C Schematic of generating Itgb6 fl/fl Pepck-Cre or Itgb6 fl/fl mice which delete αvβ6 specific in PTCs or not and experimental design. D Relative mRNA levels of renal inflammatory factors ( Tnf , Il1b , Ccl2 , and Il6 ) in Itgb6 fl/fl Pepck-Cre - or Itgb6 fl/fl -uIRI-7d mice were detected by qPCR ( n = 4-5 per group). E Comparison of pro-inflammatory (Ly6c + F4/80 int ) macrophages in Itgb6 fl/fl Pepck-Cre - or Itgb6 fl/fl -uIRI-7d mice kidneys ( n = 4-5 per group). F Western blot of α-SMA and fibronectin in Itgb6 fl/fl Pepck-Cre - or Itgb6 fl/fl -uIRI-7d mice kidneys. The quantifications of the relative levels of α-SMA/α-Tubulin and fibronectin/α-Tubulin are shown ( n = 4-5 per group). G Representative images and quantifications of Sirius Red staining in kidney sections from Itgb6 fl/fl Pepck-Cre - or Itgb6 fl/fl -uIRI-7d mice (scale bar, 100 μm) ( n = 4-5 per group). H Representative immunostaining images and correlation analysis of integrin αvβ6 and F4/80 in kidney serial sections from WT-uIRI-7d mice (scale bar, 50 μm). Black triangles indicate αvβ6-expressing tubules in serial sections ( n = 56 fields from 6 mice). I Schematic of the in vitro co-culture system. TKPTS cells transfected with si-NC or si- Itgb6 were pre-stimulated with hypoxia for 24 h or not, and then co-cultured with RAW264.7 cells for 12 h. J , K Migration and pro-inflammatory differentiation of RAW264.7 cells after co-culturing with si-NC or si- Itgb6 -transfected TKPTS cells under the hypoxic stimulation or not (scale bar, 25 μm). Pro-inflammatory differentiation is indicated by relative mRNA levels of inflammatory factors ( Tnf , Il1b Ccl2 , and Il6 ) ( n = 3 per group). Data are presented as mean ± SEM of three biological replicates. Student’s t -test ( D – G ), Pearson correlation test ( H ), and one-way ANOVA ( J , K ) were performed. * p < 0.05; ** p < 0.01; *** p < 0.001; **** p < 0.0001; ns, not significant.

    Journal: Cell Death & Disease

    Article Title: Knockout of integrin αvβ6 protects against renal inflammation in chronic kidney disease by reduction of pro-inflammatory macrophages

    doi: 10.1038/s41419-024-06785-5

    Figure Lengend Snippet: A Immunofluorescence staining for different segment-specific tubular markers (green), integrin αvβ6 (red), and DAPI (blue) in WT-uIRI-7d kidney sections (scale bar, 50 μm). Segment-specific tubular markers were used as follows: proximal tubule, LTL; distal tubule, PNA; and collecting duct, DBA. B Immunofluorescence staining for KIM-1 (green), integrin αvβ6 (red), and DAPI (blue) in uIRI-7d kidney sections (scale bar, 50 μm). C Schematic of generating Itgb6 fl/fl Pepck-Cre or Itgb6 fl/fl mice which delete αvβ6 specific in PTCs or not and experimental design. D Relative mRNA levels of renal inflammatory factors ( Tnf , Il1b , Ccl2 , and Il6 ) in Itgb6 fl/fl Pepck-Cre - or Itgb6 fl/fl -uIRI-7d mice were detected by qPCR ( n = 4-5 per group). E Comparison of pro-inflammatory (Ly6c + F4/80 int ) macrophages in Itgb6 fl/fl Pepck-Cre - or Itgb6 fl/fl -uIRI-7d mice kidneys ( n = 4-5 per group). F Western blot of α-SMA and fibronectin in Itgb6 fl/fl Pepck-Cre - or Itgb6 fl/fl -uIRI-7d mice kidneys. The quantifications of the relative levels of α-SMA/α-Tubulin and fibronectin/α-Tubulin are shown ( n = 4-5 per group). G Representative images and quantifications of Sirius Red staining in kidney sections from Itgb6 fl/fl Pepck-Cre - or Itgb6 fl/fl -uIRI-7d mice (scale bar, 100 μm) ( n = 4-5 per group). H Representative immunostaining images and correlation analysis of integrin αvβ6 and F4/80 in kidney serial sections from WT-uIRI-7d mice (scale bar, 50 μm). Black triangles indicate αvβ6-expressing tubules in serial sections ( n = 56 fields from 6 mice). I Schematic of the in vitro co-culture system. TKPTS cells transfected with si-NC or si- Itgb6 were pre-stimulated with hypoxia for 24 h or not, and then co-cultured with RAW264.7 cells for 12 h. J , K Migration and pro-inflammatory differentiation of RAW264.7 cells after co-culturing with si-NC or si- Itgb6 -transfected TKPTS cells under the hypoxic stimulation or not (scale bar, 25 μm). Pro-inflammatory differentiation is indicated by relative mRNA levels of inflammatory factors ( Tnf , Il1b Ccl2 , and Il6 ) ( n = 3 per group). Data are presented as mean ± SEM of three biological replicates. Student’s t -test ( D – G ), Pearson correlation test ( H ), and one-way ANOVA ( J , K ) were performed. * p < 0.05; ** p < 0.01; *** p < 0.001; **** p < 0.0001; ns, not significant.

    Article Snippet: The antibodies used in western blot were as follows: goat anti-mouse integrin β6 antibody (RD, AF2389), mouse anti-mouse α-SMA Ab (Sigma-Aldrich, A5228), rabbit anti-mouse Fibronectin Ab (BOSTER, BA1772), sheep anti-mouse IL-34 Ab (RD, AF5195), rabbit anti-mouse YAP Ab (CST, 14074 S), rabbit anti-mouse p-YAP (S127) Ab (CST, 4911 S), mouse anti-mouse GAPDH Ab (Abcam, ab8245), mouse anti-mouse α-Tubulin Ab (CST, 12351 S), and mouse anti-mouse β-actin Ab (Abcam, ab8226).

    Techniques: Immunofluorescence, Staining, Comparison, Western Blot, Immunostaining, Expressing, In Vitro, Co-Culture Assay, Transfection, Cell Culture, Migration

    A TKPTS cells transfected with si-NC or si- Itgb6 were pre-stimulated with hypoxia for 24 h or not, and then the relative mRNA levels of macrophage activators in TKPTS cells were detected with qPCR and shown with heatmap ( n = 3 per group). B Western blot of IL-34 in si-NC- or si- Itgb6 -transfected hypoxic TKPTS cells. The quantification of the relative levels of IL-34/β-actin is shown ( n = 4 per group). C TKPTS cells transfected with si-NC or si- Itgb6 were pre-stimulated with hypoxia for 24 h or not, and then IL-34 in supernatant was detected by ELISA ( n = 3 per group). D , E Western blot and immunostaining of IL-34 in uIRI-7d or AAN kidneys from WT and Itgb6 -/- mice (scale bar, 50 μm). The quantification of the relative levels of IL-34/α-Tubulin and quantification of IL-34 positive area proportion are shown ( n = 3–5 per group). F Immunofluorescence staining for IL-34 (red), KIM-1 (green), and DAPI (blue) in WT-uIRI-7d kidney sections (scale bar, 50 μm). G Schematic of an in vitro rescue experiment. TKPTS cells transfected with si-NC or si- Itgb6 were pre-stimulated with hypoxia for 24 h or not, and then co-cultured with RAW264.7 cells for 12 h. RmIL-34 or vehicle was supplemented into the co-culture system as indicated. H , I Migration and pro-inflammatory differentiation of RAW264.7 cells in the co-culture system (scale bar, 25 μm) ( n = 3-4 per group). J Schematic of another in vitro reverse rescue experiment. TKPTS cells transfected with oe-NC or oe- Itgb6 plasmids were pre-stimulated with hypoxia for 24 h or not, and then co-cultured with RAW264.7 cells for 12 h. Anti-IL-34 antibody (αIL-34) or isotype control (10 μg/mL) was added into the co-culture system as indicated. K , L Migration and pro-inflammatory differentiation of RAW264.7 cells in the co-culture system (scale bar, 25 μm) ( n = 3 per group). M Schematic of an in vivo rescue experiment. Itgb6 -/- mice were intraperitoneally supplemented with recombinant mouse IL-34 (rmIL-34) or vehicle (1 μg/dose) immediately and 3 days after uIRI, and WT-IRI-7d mice received vehicle served as controls. N Relative mRNA levels of renal inflammatory factors ( Tnα , Il1b , Ccl2 , and Il6 ) in WT and Itgb6 -/- mice supplemented with rmIL-34 or vehicle were detected by qPCR ( n = 4-5 per group). O Comparison of pro-inflammatory (Ly6c + F4/80 int ) macrophages in WT and Itgb6 -/- mice supplemented with rmIL-34 or vehicle ( n = 4-5 per group). P Western blot of α-SMA and fibronectin in kidneys of WT and Itgb6 -/- mice supplemented with rmIL-34 or vehicle. The quantifications of the relative levels of α-SMA/α-Tubulin and fibronectin/α-Tubulin are shown ( n = 3 per group). Q Representative images and quantifications of Sirius Red staining in kidney sections from WT and Itgb6 -/- mice supplemented with rmIL-34 or vehicle (scale bar, 100 μm) ( n = 4-5 per group). Data are presented as mean ± SEM of three biological replicates. Student’s t -test ( B , D , E , K , L ) and one-way ANOVA ( C , H – Q ) were performed. * p < 0.05; ** p < 0.01; *** p < 0.001; **** p < 0.0001. # p < 0.05; ## p < 0.01; ### p < 0.001; #### p < 0.0001; compared with si- Itgb6 + rmIL-34 group (0 ng/mL) ( H , I ); # p < 0.05; ## p < 0.01; up-regulated degree by oe- Itgb6 was compared between isotype (light blue background) and αIL-34 group (light orange background) ( K , L ); ns, not significant.

    Journal: Cell Death & Disease

    Article Title: Knockout of integrin αvβ6 protects against renal inflammation in chronic kidney disease by reduction of pro-inflammatory macrophages

    doi: 10.1038/s41419-024-06785-5

    Figure Lengend Snippet: A TKPTS cells transfected with si-NC or si- Itgb6 were pre-stimulated with hypoxia for 24 h or not, and then the relative mRNA levels of macrophage activators in TKPTS cells were detected with qPCR and shown with heatmap ( n = 3 per group). B Western blot of IL-34 in si-NC- or si- Itgb6 -transfected hypoxic TKPTS cells. The quantification of the relative levels of IL-34/β-actin is shown ( n = 4 per group). C TKPTS cells transfected with si-NC or si- Itgb6 were pre-stimulated with hypoxia for 24 h or not, and then IL-34 in supernatant was detected by ELISA ( n = 3 per group). D , E Western blot and immunostaining of IL-34 in uIRI-7d or AAN kidneys from WT and Itgb6 -/- mice (scale bar, 50 μm). The quantification of the relative levels of IL-34/α-Tubulin and quantification of IL-34 positive area proportion are shown ( n = 3–5 per group). F Immunofluorescence staining for IL-34 (red), KIM-1 (green), and DAPI (blue) in WT-uIRI-7d kidney sections (scale bar, 50 μm). G Schematic of an in vitro rescue experiment. TKPTS cells transfected with si-NC or si- Itgb6 were pre-stimulated with hypoxia for 24 h or not, and then co-cultured with RAW264.7 cells for 12 h. RmIL-34 or vehicle was supplemented into the co-culture system as indicated. H , I Migration and pro-inflammatory differentiation of RAW264.7 cells in the co-culture system (scale bar, 25 μm) ( n = 3-4 per group). J Schematic of another in vitro reverse rescue experiment. TKPTS cells transfected with oe-NC or oe- Itgb6 plasmids were pre-stimulated with hypoxia for 24 h or not, and then co-cultured with RAW264.7 cells for 12 h. Anti-IL-34 antibody (αIL-34) or isotype control (10 μg/mL) was added into the co-culture system as indicated. K , L Migration and pro-inflammatory differentiation of RAW264.7 cells in the co-culture system (scale bar, 25 μm) ( n = 3 per group). M Schematic of an in vivo rescue experiment. Itgb6 -/- mice were intraperitoneally supplemented with recombinant mouse IL-34 (rmIL-34) or vehicle (1 μg/dose) immediately and 3 days after uIRI, and WT-IRI-7d mice received vehicle served as controls. N Relative mRNA levels of renal inflammatory factors ( Tnα , Il1b , Ccl2 , and Il6 ) in WT and Itgb6 -/- mice supplemented with rmIL-34 or vehicle were detected by qPCR ( n = 4-5 per group). O Comparison of pro-inflammatory (Ly6c + F4/80 int ) macrophages in WT and Itgb6 -/- mice supplemented with rmIL-34 or vehicle ( n = 4-5 per group). P Western blot of α-SMA and fibronectin in kidneys of WT and Itgb6 -/- mice supplemented with rmIL-34 or vehicle. The quantifications of the relative levels of α-SMA/α-Tubulin and fibronectin/α-Tubulin are shown ( n = 3 per group). Q Representative images and quantifications of Sirius Red staining in kidney sections from WT and Itgb6 -/- mice supplemented with rmIL-34 or vehicle (scale bar, 100 μm) ( n = 4-5 per group). Data are presented as mean ± SEM of three biological replicates. Student’s t -test ( B , D , E , K , L ) and one-way ANOVA ( C , H – Q ) were performed. * p < 0.05; ** p < 0.01; *** p < 0.001; **** p < 0.0001. # p < 0.05; ## p < 0.01; ### p < 0.001; #### p < 0.0001; compared with si- Itgb6 + rmIL-34 group (0 ng/mL) ( H , I ); # p < 0.05; ## p < 0.01; up-regulated degree by oe- Itgb6 was compared between isotype (light blue background) and αIL-34 group (light orange background) ( K , L ); ns, not significant.

    Article Snippet: The antibodies used in western blot were as follows: goat anti-mouse integrin β6 antibody (RD, AF2389), mouse anti-mouse α-SMA Ab (Sigma-Aldrich, A5228), rabbit anti-mouse Fibronectin Ab (BOSTER, BA1772), sheep anti-mouse IL-34 Ab (RD, AF5195), rabbit anti-mouse YAP Ab (CST, 14074 S), rabbit anti-mouse p-YAP (S127) Ab (CST, 4911 S), mouse anti-mouse GAPDH Ab (Abcam, ab8245), mouse anti-mouse α-Tubulin Ab (CST, 12351 S), and mouse anti-mouse β-actin Ab (Abcam, ab8226).

    Techniques: Transfection, Western Blot, Enzyme-linked Immunosorbent Assay, Immunostaining, Immunofluorescence, Staining, In Vitro, Cell Culture, Co-Culture Assay, Migration, Control, In Vivo, Recombinant, Comparison

    (A) Dot plot showing top-20 significant GOBP terms for PF-enriched protein cluster. The size of circle represents the number of proteins and the color indicates the -log 10 p-value. (B) Dot plot showing all significant KEGG terms for PF-enriched protein cluster. The size of circle represents the number of proteins and the color indicates the -log 10 p-value. (C) Protein expression patterns of selected GOBP terms. Left panel: log 2 FC was calculated by the median of proteins expression ratio between one and the rest regions. Proteins with top30 log 2 FC value are shown. Middle panel: annotated GOBP terms of each protein. Right panel: heatmap showing protein intensities of the 30 proteins in 11 PF biological replicates. (D) Box-whisker plots of protein expression of TGFBI and FN1 in the ten regions from COVID-19 and non-COVID-19 lungs. (E) Immunofluorescence images of TGFBI and FN1 in COVID-19 PF region and non-COVID-19 alveolar region with ACTA2 also being stained to indicate the location of PF in COVID-19 lungs (scale bar = 50 μm).

    Journal: bioRxiv

    Article Title: Deep spatial proteomic exploration of severe COVID-19-related pulmonary injury in post-mortem specimens

    doi: 10.1101/2023.07.14.548971

    Figure Lengend Snippet: (A) Dot plot showing top-20 significant GOBP terms for PF-enriched protein cluster. The size of circle represents the number of proteins and the color indicates the -log 10 p-value. (B) Dot plot showing all significant KEGG terms for PF-enriched protein cluster. The size of circle represents the number of proteins and the color indicates the -log 10 p-value. (C) Protein expression patterns of selected GOBP terms. Left panel: log 2 FC was calculated by the median of proteins expression ratio between one and the rest regions. Proteins with top30 log 2 FC value are shown. Middle panel: annotated GOBP terms of each protein. Right panel: heatmap showing protein intensities of the 30 proteins in 11 PF biological replicates. (D) Box-whisker plots of protein expression of TGFBI and FN1 in the ten regions from COVID-19 and non-COVID-19 lungs. (E) Immunofluorescence images of TGFBI and FN1 in COVID-19 PF region and non-COVID-19 alveolar region with ACTA2 also being stained to indicate the location of PF in COVID-19 lungs (scale bar = 50 μm).

    Article Snippet: Other antibodies and staining reagents used in this study include rabbit anti-smooth muscle actin (SMA) antibody (1:200, 55135-1-AP, proteintech), mouse anti-TGFBI antibody (1:500, 60007-1-Ig, proteintech), mouse anti-fibronectin (FN1) antibody (1:400, GB12091, Servicebio), rabbit anti-TTF1 (NKX2-1) antibody (1:200, ab76013, Abcam), mouse anti-Cytokeratin 8 (KRT8) antibody (1:1000, GB12233, Servicebio), rabbit anti-human Myeloperoxidase (MPO) antibody (1:200, ab9535, Abcam), rabbit anti-H3-Cit antibody (1:500, ab5103, Abcam), mouse anti-human CD206 antibody (1:1000, ab300621, Abcam), rabbit anti-OSMR antibody (1:100, 10982-1-AP, proteintech), rabbit anti-IFITM3 antibody (1:800, 11714-1-AP, proteintech), rabbit anti-HGF antibody (1:200, A1193, ABclonal), rabbit anti-furin antibody (1:800, 18413-1-AP, proteintech) and DAPI (10236276001, Roche).

    Techniques: Expressing, Whisker Assay, Immunofluorescence, Staining